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Biological SciencesBiochemistry

AASERT95 Optimization of RNA Fingerprinting with Soil Extracted Messenger RNA

Authors: James T. Fleming; James F. Rice; Gary S. Sayler; TENNESSEE UNIV KNOXVILLE CENTER FOR ENVIRONMENTAL BIOTECHNOLOGY
Abstract:
The focus of the research project supported by this grant is to study the microbial ecology of bacterial populations involved in the degradation of environmental pollutants. Specifically, the purpose of this research is to further the knowledge base concerning the dynamics of gene expression within soil environments through the use of modern differential display techniques to study microbial gene expression and dioxin degrading activity associated with Agent Orange contaminated soils. Biodegradation of the herbicide Agent Orange probably involves a multitude of different microorganisms having diverse potentials for metabolic transformations of 2,4-dichlorophenoxyacetic acid (2,4, 5-trichlorophenoxyacetic acid (2,4,5-trichlorophenoxyacetic acid (2,4,5-T), and associated polychlorinated dibenzo-p-dioxins/dibenzofurans (PCDD)/DBF). Because of the complexity of microbially mediated degradation of Agent Orange constituents, a scheme was devised consisting of two-primary objectives: (1) to study the capacity of environmental bacteria to facilitate the biodegradation of 2,4-D, 2,4,5-T, and DD/DBF. (2) to identify and examine genes necessary for the degradation of these pollutants using both differential display reverse transcriptase PCR (DDTR-PCR) and other modern PCR derived techniques.

Limitations: APPROVED FOR PUBLIC RELEASE
Description: Final rept. 1 Aug 95-31 Jul 98
Pages: 5
Report Date: JUL 1998
Contract Number: F49620-95-1-0400
Report Number: A120753
Keywords relating to this report:
AGENT ORANGE
BACTERIA
BACTERIAL TOXINS
BIODEGRADATION
CONTAMINATION
DEGRADATION
DIOXINS
DISPLAY SYSTEMS
ECOLOGY
GENETICS
HERBICIDES
KNOWLEDGE BASED SYSTEMS
METABOLISM
MICROORGANISMS
RIBONUCLEIC ACIDS
SOIL CHEMISTRY
SOILS
TRANSFORMATIONS
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